Accession
MI0027770
Description
Gossypium raimondii
gra-MIR8749 precursor miRNA
Sequence
1086
reads,
236.0
reads per million, 12 experiments
gggagggugaucucggacccucaacggaagguauuguucuugugucgagauuuugucucucguauuccauggagagcccaaaggguucccggaauuuaagaagcaccuugacuaauggagauAUGACUUGUAAGCUCAUGGGAGAAaugucaauauugugcaaaauauuaauuaugcauauugcgcuugcgggaguUCAAACCACCAACCAAGGCuuaaaggccuuaccuuuacauccacaaaauacaagagagacaaaaucccaacacaugaacgauacuuuucguugggguuugagaccgacauuccuu
(((((.(((.((((((((((.((((((((((((((((((.(((((.(.((((((((((((((((((...((((((((((...))))))(((....(((((......)))))....))).(((((..(((.((......)).)))..))))).....((((((.(((....))).))))))..((.((((.((..((....))..))...)))))).((((((.....))))))..))))...)))))..))))))))))))).).))))).)))))))))))))))))))))))))))).).)).))))).
(((((.(((.((((((((((.((((((((((((((((((.(((((.(.((((((((((((((((((...((((((((((...))))))(((....(((((......)))))....))).(((((..(((.((......)).)))..))))).....((((((.(((....))).))))))..((.((((.((..((....))..))...)))))).((((((.....))))))..))))...)))))..))))))))))))).).))))).)))))))))))))))))))))))))))).).)).))))).
Structure
- g - a u u c a -- cca --------------------------------------gagcccaaaggguucccggaauuuaagaagcaccuugacuaaugga GA G AG gggag gu g ucucggaccc caacggaagguauuguuc ugugu g gauuuugucucuc guauu ugga gauAU CUU UA C ||||| || | |||||||||| |||||||||||||||||| ||||| | ||||||||||||| ||||| |||| ||||| ||| || uccuu ca c agaguuuggg guugcuuuucauagcaag acaca c cuaaaacagagag cauaa accu cugua GAG GU U u a g c - u a c aa aac acauuuccauuccggaaauuCGGAACCAACCACCAAACUugagggcguucgcguuauacguauuaauuauaaaacguguuauaa AA G AC
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
chr11: 60620749-60621059 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from gra-MIR8749
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature gra-miR8749-5p
| Accession | MIMAT0034175 |
| Description | Gossypium raimondii gra-miR8749-5p mature miRNA |
| Sequence | 123 - AUGACUUGUAAGCUCAUGGGAGAA - 146 |
| Evidence |
experimental
Illumina [1] |
Mature gra-miR8749-3p
| Accession | MIMAT0055491 |
| Description | Gossypium raimondii gra-miR8749-3p mature miRNA |
| Sequence | 197 - UCAAACCACCAACCAAGGC - 215 |
| Evidence |
experimental
unknown |
References
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