miRBase entry: gra-MIR7494e

Stem-loop gra-MIR7494e


Accession
MI0027768
Description
Gossypium raimondii gra-MIR7494e precursor miRNA


Sequence

336 reads, 67.0 reads per million, 13 experiments
ccgcuaaaggUCGUGAUCUUUAGCGGUGUUUgugauaaaagcgccgCUAAAGGCCAUGAUCUUUAGCGGC
(((((((((((((((.(((((((((((((((.......))))))))))))))).))))))))))))))).

Structure
-               A               gu 
 ccgcuaaaggUCGUG UCUUUAGCGGUGUUU  g
 ||||||||||||||| |||||||||||||||  a
 GGCGAUUUCUAGUAC GGAAAUCgccgcgaa  u
C               C               aa 


Annotation confidence Low
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Genome context
chr12: 14711186-14711255 [-]

Database links

Mature gra-miR7494e-5p

Accession MIMAT0034173
Description Gossypium raimondii gra-miR7494e-5p mature miRNA
Sequence 11 - UCGUGAUCUUUAGCGGUGUUU - 31
Evidence experimental
Illumina [1]

Mature gra-miR7494e-3p

Accession MIMAT0055490
Description Gossypium raimondii gra-miR7494e-3p mature miRNA
Sequence 47 - CUAAAGGCCAUGAUCUUUAGCGGC - 70
Evidence experimental
unknown

References

  1. PubMed ID: 24044642
    Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
    Xue W, Wang Z, Du M, Liu Y, Liu JY
    BMC Genomics (2013) 14:629