miRBase entry: gra-MIR8746

Stem-loop gra-MIR8746


Accession
MI0027765
Description
Gossypium raimondii gra-MIR8746 precursor miRNA


Sequence

16425 reads, 2577.0 reads per million, 11 experiments
ugucuuucuaUAAGAGAUAGUGCAAUAUGGAGgcuugagcaaagugaaaaugauauuuuacuauguuucaagucUCCAUAUUUCACUAUCUCUUAucccuuauga
.........(((((((((((((.((((((((((((((((((.(((((((......))))))).)).)))))))))))))))).))))))))))))).........

Structure
ugucuuucu             C                -  a       au 
         aUAAGAGAUAGUG AAUAUGGAGgcuugag ca agugaaa  g
         ||||||||||||| |||||||||||||||| || |||||||   
         uAUUCUCUAUCAC UUAUACCUcugaacuu gu ucauuuu  a
aguauuccc             U                u  a       au 


Annotation confidence High
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Genome context
chr2: 11723652-11723756 [+]

Database links

Mature gra-miR8746-5p

Accession MIMAT0055489
Description Gossypium raimondii gra-miR8746-5p mature miRNA
Sequence 11 - UAAGAGAUAGUGCAAUAUGGAG - 32
Evidence experimental
unknown

Mature gra-miR8746-3p

Accession MIMAT0034170
Description Gossypium raimondii gra-miR8746-3p mature miRNA
Sequence 75 - UCCAUAUUUCACUAUCUCUUA - 95
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24044642
    Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
    Xue W, Wang Z, Du M, Liu Y, Liu JY
    BMC Genomics (2013) 14:629