Accession
MI0027764
Description
Gossypium raimondii
gra-MIR8709b precursor miRNA
Sequence
571
reads,
128.0
reads per million, 12 experiments
aucuuuaugggauaaucuuaaaauuauacauuaacuuuauuuuacuguguaauuuuauacaugaaauuuuaauuugauuucauuuucacaauuuauuaacacgauuauugauauaacaUCAUUUUAUGUUUAUAUAUuucaugcacaaauaacuauauuuauacaauaaaaaagguaaugugauguauuuauuuuuuaaaauguguauauaauugaaucaauauuaaaguuuuauguauauauauuugaaccaaagucaaaguuucauauauauaacuacaccaaaucaaaauuaauguauaaaauuacacauugaauuaaaauUCAUGUAUAAUUUUGAGAUUUGUCucauuuuuau
......(((((((((((((((((((((((((.((.((((.((((.(((((((((((((((((..((((((.(((((.........................(((((((..((((((((((((.((((.(((.....(((..((...(((((....)))))...))..)))))).)))).)))))))...............)))))..)))))))............((((.(((((((..(..(((((.......)))))..)..))))))).))))....))))).)))))).))))))))))))))))).)))).)))).)).)))))))))))))))).)))))))))......
......(((((((((((((((((((((((((.((.((((.((((.(((((((((((((((((..((((((.(((((.........................(((((((..((((((((((((.((((.(((.....(((..((...(((((....)))))...))..)))))).)))).)))))))...............)))))..)))))))............((((.(((((((..(..(((((.......)))))..)..))))))).))))....))))).)))))).))))))))))))))))).)))).)))).)).)))))))))))))))).)))))))))......
Structure
aucuuu - u c u c ga a ------------------------------------------auuucauuuucacaauuuauuaaca ug --------------- U G AUAUA ca cac a
augggauaa ucuuaaaauuauacau aa uuua uuua uguguaauuuuauacau aauuuu auuug cgauuau auaua acaUCAU UUAU UUU Uuu ug aaaua c
||||||||| |||||||||||||||| || |||| |||| ||||||||||||||||| |||||| ||||| ||||||| ||||| ||||||| |||| ||| ||| || |||||
uacuCUGUU AGAGUUUUAAUAUGUA Uu aaau aagu acacauuaaaauaugua uuaaaa uaaac guuaaua ugugu uguagug aaug aaa aaa ac uuuau u
uauuuu U C a u u -a c cacaucaauauauauacuuugaaacugaaaccaaguuuauauauauguauuuugaaauuauaacuaa ua aaaauuuuuuauuua u g ----- ua aua a
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
chr7: 23636490-23636847 [-]
Database links
Mature gra-miR8709b-5p
| Accession | MIMAT0055488 |
| Description | Gossypium raimondii gra-miR8709b-5p mature miRNA |
| Sequence | 119 - UCAUUUUAUGUUUAUAUAU - 137 |
| Evidence |
experimental
unknown |
Mature gra-miR8709b-3p
| Accession | MIMAT0034169 |
| Description | Gossypium raimondii gra-miR8709b-3p mature miRNA |
| Sequence | 325 - UCAUGUAUAAUUUUGAGAUUUGUC - 348 |
| Evidence |
experimental
Illumina [1] |
References
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