Accession
MI0027760
Description
Gossypium raimondii
gra-MIR8744 precursor miRNA
Sequence
8169
reads,
760.0
reads per million, 12 experiments
uucccacuacUCAAAAAAUGGGCAAAGUAGUCAUuuagaucaaauagcaaauucaucuuuucuauuaaaaauuucauccuuuucgcuguuaaaaacuuaucuuuguaagucagccucagauacacauguauuugauuaucugucaguuacgccaguuuuuaacaguaaaaAUGGAUGAAAUUUUUAACAGAAaauaccaucuugcuuuuugaucuaacauauaaagacuauuuuacucauuuuuugaauagagagaaa
(((.(.(((.((((((((((((.(((((((((..((((((((((.(((((.......((((((.(((((((((((((((((((.(((((((((((((......(((((..(((..((((((((....))))))))....)))....)))))..))))))))))))).)))).))))))))))))))).)))))).......))))).))))))))))........))))))))).)))))))))))).))).).))).
(((.(.(((.((((((((((((.(((((((((..((((((((((.(((((.......((((((.(((((((((((((((((((.(((((((((((((......(((((..(((..((((((((....))))))))....)))....)))))..))))))))))))).)))).))))))))))))))).)))))).......))))).))))))))))........))))))))).)))))))))))).))).).))).
Structure
- c a c C ------AU u auucauc a - c uaucuu --gu --cc a uuc c cua UCAAAAAAUGGG AAAGUAGUC uuagaucaaa agcaa uuuucu uuaaaaauuucaucc uuuu gcuguuaaaaacu uguaa cag ucagauac c ||| | ||| |||||||||||| ||||||||| |||||||||| ||||| |||||| ||||||||||||||| |||| ||||||||||||| ||||| ||| |||||||| aag g gau aguuuuuuacuc uuuuaucag aaucuaguuu ucguu aaAAGA AAUUUUUAAAGUAGG Aaaa ugacaauuuuuga gcauu guc aguuuaug a a a a a a aaauauac u cuaccau C U a ----cc gacu uauu u
Annotation confidence
Low
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Genome context
chr7: 60032403-60032660 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from gra-MIR8744
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature gra-miR8744-5p
| Accession | MIMAT0034165 |
| Description | Gossypium raimondii gra-miR8744-5p mature miRNA |
| Sequence | 11 - UCAAAAAAUGGGCAAAGUAGUCAU - 34 |
| Evidence |
experimental
Illumina [1] |
Mature gra-miR8744-3p
| Accession | MIMAT0055484 |
| Description | Gossypium raimondii gra-miR8744-3p mature miRNA |
| Sequence | 171 - AUGGAUGAAAUUUUUAACAGAA - 192 |
| Evidence |
experimental
unknown |
References
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