Accession
MI0027754
Description
Gossypium raimondii
gra-MIR8742b precursor miRNA
Sequence
193
reads,
53.0
reads per million, 11 experiments
aggaauguucccagucCAAGAUGAAUAAGAUAGCUGUuuuagcuguuuuaguacuacaucguguauuuacuccuccucaacuguuuuagcaugaauagcuaucuuauucAUCUUGGACUGUGAACAUUCC
.(((((((((.((((((((((((((((((((((((((((..((((...((((........(((....))).........))))...))))..)))))))))))))))))))))))))))).)))))))))
.(((((((((.((((((((((((((((((((((((((((..((((...((((........(((....))).........))))...))))..)))))))))))))))))))))))))))).)))))))))
Structure
a c ua uuu -acuacauc u ggaauguuc cagucCAAGAUGAAUAAGAUAGCUGUuu gcug uagu gug a ||||||||| |||||||||||||||||||||||||||| |||| |||| ||| CCUUACAAG GUCAGGUUCUAcuuauucuaucgauaag cgau guca cau u - U ua uuu acuccuccu u
Annotation confidence
Not enough data
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Genome context
chr11: 53348538-53348667 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from gra-MIR8742b
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature gra-miR8742b-5p
| Accession | MIMAT0055479 |
| Description | Gossypium raimondii gra-miR8742b-5p mature miRNA |
| Sequence | 17 - CAAGAUGAAUAAGAUAGCUGU - 37 |
| Evidence |
experimental
unknown |
Mature gra-miR8742b-3p
| Accession | MIMAT0034159 |
| Description | Gossypium raimondii gra-miR8742b-3p mature miRNA |
| Sequence | 110 - AUCUUGGACUGUGAACAUUCC - 130 |
| Evidence |
experimental
Illumina [1] |
References
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