miRBase entry: gra-MIR7492n

Stem-loop gra-MIR7492n


Accession
MI0027750
Description
Gossypium raimondii gra-MIR7492n precursor miRNA


Sequence

922 reads, 171.0 reads per million, 13 experiments
caaacgcugcUAUAGAUCAGGGUCUUUAGCGGCGcuuuuuuacAAAUGCCGCUAUAGAUCAgggucuuuagcagcgcuuc
....((((((((.(((((..(((((.((((((((.(((.....))))))))))).)))))..))))).))))))))....

Structure
caaa        U     AG     U        c   u 
    cgcugcUA AGAUC  GGUCU UAGCGGCG uuu u
    |||||||| |||||  ||||| |||||||| ||| u
    gcgacgau ucugg  CUAGA AUCGCCGU AAA a
cuuc        u     gA     U        -   c 


Annotation confidence Low
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Genome context
chr13: 12929580-12929659 [+]

Database links

Mature gra-miR7492n-5p

Accession MIMAT0034155
Description Gossypium raimondii gra-miR7492n-5p mature miRNA
Sequence 11 - UAUAGAUCAGGGUCUUUAGCGGCG - 34
Evidence experimental
Illumina [1]

Mature gra-miR7492n-3p

Accession MIMAT0055476
Description Gossypium raimondii gra-miR7492n-3p mature miRNA
Sequence 44 - AAAUGCCGCUAUAGAUCA - 61
Evidence experimental
unknown

References

  1. PubMed ID: 24044642
    Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
    Xue W, Wang Z, Du M, Liu Y, Liu JY
    BMC Genomics (2013) 14:629