Stem-loop gra-MIR7486i

Accession

MI0027737

Description

Gossypium raimondii gra-MIR7486i precursor miRNA

Sequence

1391 reads, 292.0 reads per million, 13 experiments

agcgcaaccuGCUGACGUGGAAGGAAAUCGCUAccucagggacgCGAUUUCCUUCCACGUCGGCuaggucgcgcug
(((((.(((((((((((((((((((((((((..((....))..))))))))))))))))))))).)))).))))).

Structure

-     a    -                     UA  u 
 agcgc accu GCUGACGUGGAAGGAAAUCGC  cc c
 ||||| |||| |||||||||||||||||||||  ||  
 ucgcg ugga CGGCUGCACCUUCCUUUAGCg  gg a
g     c    u                     ca  g 

Annotation confidence Medium

Genome context

chr11: 29742716-29742791 [+]

Mature gra-miR7486i-5p

• Accession: MIMAT0034142
• Description: Gossypium raimondii gra-miR7486i-5p mature miRNA
• Sequence: 11 - GCUGACGUGGAAGGAAAUCGCUA - 33
• Evidence: experimental ; Illumina [1]

Mature gra-miR7486i-3p

• Accession: MIMAT0055464
• Description: Gossypium raimondii gra-miR7486i-3p mature miRNA
• Sequence: 45 - CGAUUUCCUUCCACGUCGGC - 64
• Evidence: experimental ; unknown

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629