Stem-loop gra-MIR7492i

Accession

MI0027721

Description

Gossypium raimondii gra-MIR7492i precursor miRNA

Sequence

1340 reads, 280.0 reads per million, 13 experiments

ggcguuuucuggagaagcgccgcuaaagaucauuaucguuagcggcguuuguuuuguaagugccgCUAAAGACCAUGACCUUUAGCgguguuugucauaaaagugucguuaaagagCGUGAUCUUUAGCGGCGUUUGugggaaaagc
.((.((((((.(..(((((((((((((((((((..((.((((((((((((....(((((((((((((((((........))))))))))))))).))...)))))))))))).))..))))))))))))))))))).).))))))))

Structure

g  g      g ag                   ua  g            guuu  -               ACC 
 gc uuuucu g  aagcgccgcuaaagaucau  uc uuagcggcguuu    ug uaagugccgCUAAAG   A
 || |||||| |  |||||||||||||||||||  || ||||||||||||    || |||||||||||||||    
 cg aaaagg u  UUUGCGGCGAUUUCUAGUG  ag aauugcugugaa    ac guuuguggCGAUUUC   U
-  -      g -G                   Cg  a            -aau  u               CAG 

Annotation confidence Low

Genome context

chr3: 28533659-28533805 [+]

Mature gra-miR7492i-5p

• Accession: MIMAT0055453
• Description: Gossypium raimondii gra-miR7492i-5p mature miRNA
• Sequence: 66 - CUAAAGACCAUGACCUUUAGC - 86
• Evidence: experimental ; unknown

Mature gra-miR7492i-3p

• Accession: MIMAT0034126
• Description: Gossypium raimondii gra-miR7492i-3p mature miRNA
• Sequence: 117 - CGUGAUCUUUAGCGGCGUUUG - 137
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629