miRBase entry: gra-MIR7492h

Stem-loop gra-MIR7492h


Accession
MI0027720
Description
Gossypium raimondii gra-MIR7492h precursor miRNA


Sequence

906 reads, 183.0 reads per million, 13 experiments
cgcuaaaggcCGUGAUCUUUAGCGGCGUUUGuguaaaaGCGCCGCUAAAGGUCAUGAcuuuuagcgg
(((((((((.((((((((((((((((((((......)))))))))))))))))))).))))))))).

Structure
-         c                    Gu 
 cgcuaaagg CGUGAUCUUUAGCGGCGUUU  g
 ||||||||| ||||||||||||||||||||   
 gcgauuuuc GUACUGGAAAUCGCCGCGaa  u
g         A                    aa 


Annotation confidence Medium
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Genome context
chr3: 19591404-19591470 [+]

Database links

Mature gra-miR7492h-5p

Accession MIMAT0034125
Description Gossypium raimondii gra-miR7492h-5p mature miRNA
Sequence 11 - CGUGAUCUUUAGCGGCGUUUG - 31
Evidence experimental
Illumina [1]

Mature gra-miR7492h-3p

Accession MIMAT0055452
Description Gossypium raimondii gra-miR7492h-3p mature miRNA
Sequence 39 - GCGCCGCUAAAGGUCAUGA - 57
Evidence experimental
unknown

References

  1. PubMed ID: 24044642
    Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
    Xue W, Wang Z, Du M, Liu Y, Liu JY
    BMC Genomics (2013) 14:629