miRBase entry: gra-MIR7486g

Stem-loop gra-MIR7486g


Accession
MI0027717
Description
Gossypium raimondii gra-MIR7486g precursor miRNA


Sequence

916 reads, 174.0 reads per million, 13 experiments
cacgucagagCGCUUUGCUGACGUGGAAACAAAUcgcuuccacaaaagcacgauuuguguccacaucagCAAAGUGCGCUGACGUGG
((((((((.((((((((((((.(((((.(((((((((((......))))..))))))).))))).)))))))))))).)))))))).

Structure
-        a            C     A       --    cc 
 cacgucag gCGCUUUGCUGA GUGGA ACAAAUc  gcuu  a
 |||||||| |||||||||||| ||||| |||||||  ||||   
 GUGCAGUC CGUGAAACgacu caccu uguuuag  cgaa  c
G        G            a     g       ca    aa 


Annotation confidence Low
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Genome context
chr2: 23259411-23259497 [-]

Database links

Mature gra-miR7486g-5p

Accession MIMAT0034122
Description Gossypium raimondii gra-miR7486g-5p mature miRNA
Sequence 11 - CGCUUUGCUGACGUGGAAACAAAU - 34
Evidence experimental
Illumina [1]

Mature gra-miR7486g-3p

Accession MIMAT0055450
Description Gossypium raimondii gra-miR7486g-3p mature miRNA
Sequence 70 - CAAAGUGCGCUGACGUGG - 87
Evidence experimental
unknown

References

  1. PubMed ID: 24044642
    Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
    Xue W, Wang Z, Du M, Liu Y, Liu JY
    BMC Genomics (2013) 14:629