miRBase entry: gra-MIR7486f

Stem-loop gra-MIR7486f


Accession
MI0027716
Description
Gossypium raimondii gra-MIR7486f precursor miRNA


Sequence

1069 reads, 193.0 reads per million, 13 experiments
cacgucagcgCGCUUUGCUGACGUGGAAACAAAUcgcguccucugaagcucgaUUUGUUGCCAUGUCAGCAAagcgcgcagacgugg
((((((.(((((((((((((((((((.(((((((((.((........)).))))))))).))))))))))))))))))).)))))).

Structure
-      a                   A         c  ccu 
 cacguc gcgCGCUUUGCUGACGUGG AACAAAUcg gu   c
 |||||| ||||||||||||||||||| ||||||||| ||    
 gugcag cgcgcgaAACGACUGUACC UUGUUUagc cg   u
g      a                   G         u  aag 


Annotation confidence Low
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Genome context
chr13: 8363683-8363769 [+]

Database links

Mature gra-miR7486f-5p

Accession MIMAT0034121
Description Gossypium raimondii gra-miR7486f-5p mature miRNA
Sequence 11 - CGCUUUGCUGACGUGGAAACAAAU - 34
Evidence experimental
Illumina [1]

Mature gra-miR7486f-3p

Accession MIMAT0055449
Description Gossypium raimondii gra-miR7486f-3p mature miRNA
Sequence 54 - UUUGUUGCCAUGUCAGCAA - 72
Evidence experimental
unknown

References

  1. PubMed ID: 24044642
    Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
    Xue W, Wang Z, Du M, Liu Y, Liu JY
    BMC Genomics (2013) 14:629