Accession
MI0027694
Description
Gossypium raimondii
gra-MIR8711 precursor miRNA
Sequence
115
reads,
26.0
reads per million, 11 experiments
uuaaacaaaaAUACUACACUAAGGGCACUAGAUCccaacagucucacacaugcauugaugaaguagaugagccauaguucacauuaccauacucucuauauguuuccccauucucuuagccaccagagucuugguaaaacaaauauacaagguuauccucagauguagUUUUGACUACAUCCACUAUUCUaucaauuucuaucgucucucuuaugacacuuucuauuaauguguugugucuucaugugguuucuuugguguuuagcuauuuuugcauug
.....((((((((((((((((((((.((((.((....(((.....((((((..(((((((.(((((.(((((....)))))...............(((.(((((..(((..((((........))))...)))..))))).)))....(((....)))..((((((((....))))))))..))))).))))))).......(((........)))...........))))))..)))....)).)))).))))))))))..)).)))))))).....
.....((((((((((((((((((((.((((.((....(((.....((((((..(((((((.(((((.(((((....)))))...............(((.(((((..(((..((((........))))...)))..))))).)))....(((....)))..((((((((....))))))))..))))).))))))).......(((........)))...........))))))..)))....)).)))).))))))))))..)).)))))))).....
Structure
uuaaa - -- C G Ccca gucuc ------------------------------gc a augagccauaguucacauuaccauacucucuauauguuuccccauucucuuagccaccagagucuugguaaaacaaauauacaagguuauccuca U
caaaaAUA CU ACACUAAGGG ACUA AU aca acacau auugaug aguag gauguagU U
|||||||| || |||||||||| |||| || ||| |||||| ||||||| ||||| ||||||||
guuuuuau ga ugugguuucu uggu ua ugu ugugua uaacuaU UUAUC CUACAUCA U
guuac c uu u g cuuc ---gu auuaucuuucacaguauucucucugcuaucuu C ---------------------------------------------------------------------------------------------AC G
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
chr5: 19980282-19980560 [-]
Database links
Mature gra-miR8711-5p
| Accession | MIMAT0034099 |
| Description | Gossypium raimondii gra-miR8711-5p mature miRNA |
| Sequence | 11 - AUACUACACUAAGGGCACUAGAUC - 34 |
| Evidence |
experimental
Illumina [1] |
Mature gra-miR8711-3p
| Accession | MIMAT0055433 |
| Description | Gossypium raimondii gra-miR8711-3p mature miRNA |
| Sequence | 169 - UUUUGACUACAUCCACUAUUCU - 190 |
| Evidence |
experimental
unknown |
References
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