Accession
MI0027692
Description
Gossypium raimondii
gra-MIR8710a precursor miRNA
Sequence
1153
reads,
220.0
reads per million, 13 experiments
uaucaaauuuAUACAUGAACUUUGGUCCAAugugcaauuucauaaaugagcuuuaauuauacaccuagaccucaaauugugguucaaauauauuaauggaaguuugauuuugauucaauuacacacauuuaaaaaaugaauacauacauuuauuuucauauguacggcauuacacAUUAGAUCAAAAUUCAUGUAUgcuuugauau
(((((((..((((((((((.(((((((.((((((.....(((.(((((((((((.((((........((((.((...)).)))).........)))).))))))).)))))))...........((((....(((((((((......)))))))))...)))).........)))))).))))))).)))))))))).))))))).
(((((((..((((((((((.(((((((.((((((.....(((.(((((((((((.((((........((((.((...)).)))).........)))).))))))).)))))))...........((((....(((((((((......)))))))))...)))).........)))))).))))))).)))))))))).))))))).
Structure
- uu C C ------------------------------------------------------caauu u - a -uacaccua u a uaucaaa uAUACAUGAA UUUGGUC AAugug uca aaau gagcuuu auua gacc ca ||||||| |||||||||| ||||||| |||||| ||| |||| ||||||| |||| |||| || a auaguuu gUAUGUACUU AAACUAG UUAcac agu uuua uuugaag uaau uugg gu u -c A A auuacggcauguauacuuuuauuuacauacauaaguaaaaaauuuacacacauuaacuu - g g uauauaaac u u
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
chr11: 1450830-1451035 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from gra-MIR8710a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature gra-miR8710a-5p
| Accession | MIMAT0034097 |
| Description | Gossypium raimondii gra-miR8710a-5p mature miRNA |
| Sequence | 11 - AUACAUGAACUUUGGUCCAA - 30 |
| Evidence |
experimental
Illumina [1] |
Mature gra-miR8710a-3p
| Accession | MIMAT0055432 |
| Description | Gossypium raimondii gra-miR8710a-3p mature miRNA |
| Sequence | 176 - AUUAGAUCAAAAUUCAUGUAU - 196 |
| Evidence |
experimental
unknown |
References
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