Accession
MI0027689
Description
Gossypium raimondii
gra-MIR8707 precursor miRNA
Sequence
1839
reads,
382.0
reads per million, 12 experiments
uaaaauggcuauugaauuuuucaaaauuuuuuacuuaaaccaacgcuuauuguauggcuuucauuguguacaaugcuugugccaauugaaagcuuucauuuucauuuucuuuuauaguuuaauauuuuuuuucuugaAAUAGCUUUAAACAUCACGAAUauacggauuaaaauauaaauaaauuuuuucucuaaucuucaacauugaucaucaaaucaauuaagaucuaaggaauguuuuacucaucaauagguauugauuuaucacaucgaucgucgaaucgucguuuggaguucaauagcugaauuuaaaaaaaaaauuaauaacucaauaacuuaaAUAAAAACUUUUGAAUAAUUCAGUgauuucaaug
.........(((((((((.(((((((.((((((.((((..(((.((((((((.(((((((((((((.((((((...))))))))).))))))).................((((((.((((((.......(((.(((..............))).))).......)))))).))))))((((...(((((...(((((....((((((......)))))).)))))...)))))...))))..))))))))))).)))...........(((.((.((...)).)).)))(((((((.....)))))))..........................)))).)))))).))))))).))))))))).........
.........(((((((((.(((((((.((((((.((((..(((.((((((((.(((((((((((((.((((((...))))))))).))))))).................((((((.((((((.......(((.(((..............))).))).......)))))).))))))((((...(((((...(((((....((((((......)))))).)))))...)))))...))))..))))))))))).)))...........(((.((.((...)).)).)))(((((((.....)))))))..........................)))).)))))).))))))).))))))))).........
Structure
uaaaauggc u u c ---------------------------------------------------------------------------ac c u -----------gcuuucauuguguacaaugcuugugccaauugaaagcuuucauuuucauuuucu g auuuuuu u AAUAGC
uauugaauu uucaaaa uuuuua uuaa caa gcuuauug aug uuuaua uuuaau uuc uga U
||||||||| ||||||| |||||| |||| ||| |||||||| ||| |||||| |||||| ||| |||
gUGACUUAA AAGUUUU AAAAAU aauu guu uggauaac uac aaauau aaauua AAG ACU U
guaacuuua U C A caauaacucaauaauuaaaaaaaaaauuuaagucgauaacuugagguuugcugcuaagcugcuagcuacacuauuua a - ucauuuuguaaggaaucuagaauuaacuaaacuacuaguuacaacuucuaaucucuuuuuuaaau a ggcauaU C ACAAAU
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
chr10: 117161-117533 [+]
Database links
Mature gra-miR8707-5p
| Accession | MIMAT0055429 |
| Description | Gossypium raimondii gra-miR8707-5p mature miRNA |
| Sequence | 138 - AAUAGCUUUAAACAUCACGAAU - 159 |
| Evidence |
experimental
unknown |
Mature gra-miR8707-3p
| Accession | MIMAT0034094 |
| Description | Gossypium raimondii gra-miR8707-3p mature miRNA |
| Sequence | 340 - AUAAAAACUUUUGAAUAAUUCAGU - 363 |
| Evidence |
experimental
Illumina [1] |
References
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