miRBase entry: gra-MIR8706a

Stem-loop gra-MIR8706a


Accession
MI0027687
Description
Gossypium raimondii gra-MIR8706a precursor miRNA


Sequence

184 reads, 48.0 reads per million, 11 experiments
auuuaaguugAGUUUUAGGAUUGAUUUGAUGAAAguaaauugcuaauauuAUUAGCUAAUUAUGAAUUUUuauuaaaucaacucugaaacucgaauucaac
.......((((((((((((.((((((((((((((((.((((((((((...)))))).))))....)))))))))))))))).)))))))))))).......

Structure
auuuaag            A                ---a    -      a 
       uugAGUUUUAGG UUGAUUUGAUGAAAgu    aauu gcuaau  
       |||||||||||| ||||||||||||||||    |||| |||||| u
       agcucaaagucu aacuaaauuauUUUUA    UUAA CGAUUA  
caacuua            c                AGUA    U      u 


Annotation confidence Low
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Genome context
chr10: 7112929-7113029 [+]

Database links

Mature gra-miR8706a-5p

Accession MIMAT0034092
Description Gossypium raimondii gra-miR8706a-5p mature miRNA
Sequence 11 - AGUUUUAGGAUUGAUUUGAUGAAA - 34
Evidence experimental
Illumina [1]

Mature gra-miR8706a-3p

Accession MIMAT0055428
Description Gossypium raimondii gra-miR8706a-3p mature miRNA
Sequence 51 - AUUAGCUAAUUAUGAAUUUU - 70
Evidence experimental
unknown

References

  1. PubMed ID: 24044642
    Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
    Xue W, Wang Z, Du M, Liu Y, Liu JY
    BMC Genomics (2013) 14:629