Stem-loop gra-MIR7504h

Accession

MI0027665

Description

Gossypium raimondii gra-MIR7504h precursor miRNA

Sequence

699 reads, 155.0 reads per million, 11 experiments

uuuucuaauaggaCAAAUCAGAUUUUUCCUCUUgauuucagcauuuuccuccuggcaaaauuuaaauccaacugaaaaugcuaaaauucAGGAGGAAUAAGUCUGAUUUGUCAuucucuuauu
...........(((((((((((((((((((((((((((.(((((((((....(((............)))...))))))))).))).)))))))))).))))))))))))))...........

Structure

uuuucuaauag              -          -   c         cucc   caaaa 
           gaCAAAUCAGAUUU UUCCUCUUga uuu agcauuuuc    ugg     u
           |||||||||||||| |||||||||| ||| |||||||||    |||      
           CUGUUUAGUCUGAA AAGGAGGAcu aaa ucguaaaag    acc     u
uuauucucuuA              U          u   a         -uca   uaaau 

Annotation confidence Low

Genome context

chr7: 55185842-55185964 [+]

Mature gra-miR7504h-5p

• Accession: MIMAT0055414
• Description: Gossypium raimondii gra-miR7504h-5p mature miRNA
• Sequence: 14 - CAAAUCAGAUUUUUCCUCUU - 33
• Evidence: experimental ; unknown

Mature gra-miR7504h-3p

• Accession: MIMAT0034070
• Description: Gossypium raimondii gra-miR7504h-3p mature miRNA
• Sequence: 90 - AGGAGGAAUAAGUCUGAUUUGUCA - 113
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629