Stem-loop gra-MIR8692

Accession

MI0027660

Description

Gossypium raimondii gra-MIR8692 precursor miRNA

Sequence

6006 reads, 995.0 reads per million, 13 experiments

ucaggauaucgcguccauguCAGCGCGACCUGCUGACGUGGcgugauuuccuuccacgucAGCAGGUCGCGCUGACGUGGACAcgauguccug
.((((((((((.(((((((((((((((((((((((((((((.(......)...))))))))))))))))))))))))))))).))))))))))

Structure

u          c                             --c ug 
 caggauaucg guccauguCAGCGCGACCUGCUGACGUGG   g  a
 |||||||||| |||||||||||||||||||||||||||||   |   
 guccuguagc CAGGUGCAGUCGCGCUGGACGAcugcacc   c  u
-          A                             uuc uu 

Annotation confidence Low

Genome context

chr1: 35588894-35588986 [-]

Mature gra-miR8692-5p

• Accession: MIMAT0055409
• Description: Gossypium raimondii gra-miR8692-5p mature miRNA
• Sequence: 21 - CAGCGCGACCUGCUGACGUGG - 41
• Evidence: experimental ; unknown

Mature gra-miR8692-3p

• Accession: MIMAT0034065
• Description: Gossypium raimondii gra-miR8692-3p mature miRNA
• Sequence: 61 - AGCAGGUCGCGCUGACGUGGACA - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629