Stem-loop gra-MIR7505b

Accession

MI0027572

Description

Gossypium raimondii gra-MIR7505b precursor miRNA

Sequence

242577 reads, 18206.0 reads per million, 13 experiments

acuguuaucuACAGCUUUAGAAAUCAUCCCUuuuuuagauguguaaauauauaaauaaauugaagcacauugcuagaaagggAUGAUUUCUAAAGCUCUAGAUaacguu
..(((((((((.(((((((((((((((((((((((..(((((((....................)))))))...))))))))))))))))))))))).)))))))))..

Structure

ac         C                       -ua       aaauauaua 
  uguuaucuA AGCUUUAGAAAUCAUCCCUuuuu   gaugugu         a
  ||||||||| |||||||||||||||||||||||   |||||||          
  gcaaUAGAU UCGAAAUCUUUAGUAgggaaaga   uuacacg         a
uu         C                       ucg       aaguuaaau 

Annotation confidence Medium

Genome context

chr10: 18588372-18588480 [+]

Mature gra-miR7505b-5p

• Accession: MIMAT0033977
• Description: Gossypium raimondii gra-miR7505b-5p mature miRNA
• Sequence: 11 - ACAGCUUUAGAAAUCAUCCCU - 31
• Evidence: experimental ; Illumina [1]

Mature gra-miR7505b-3p

• Accession: MIMAT0055349
• Description: Gossypium raimondii gra-miR7505b-3p mature miRNA
• Sequence: 83 - AUGAUUUCUAAAGCUCUAGAU - 103
• Evidence: experimental ; unknown

References

1. PubMed ID: 24044642
   Genome-wide analysis of small RNAs reveals eight fiber elongation-related and 257 novel microRNAs in elongating cotton fiber cells
   Xue W, Wang Z, Du M, Liu Y, Liu JY
   BMC Genomics (2013) 14:629