Accession
MI0027537
Description
Amborella trichopoda
atr-MIR396c precursor miRNA
Sequence
14412
reads,
5205
reads per million, 4 experiments
gagagaguggggcauguaaagagcaaugugguggaagagauggagagagaauuggaaguccugucaugcuuUUCCACAGCUUUCUUGAACUUcuuuaguccuugaauggcaucuagaaguucaaggaaguugugggaaaccauggcaauaaggauuuuuuaauugcaggagcaccccaccuuuc
(((((.((((((..(((.....(((((..........................(((((((((((((((.(((((((((((((((((((((((((.....((......)).....))))))))))))))))))))))))).))))))....)))))))))..)))))....))))))))))))))
(((((.((((((..(((.....(((((..........................(((((((((((((((.(((((((((((((((((((((((((.....((......)).....))))))))))))))))))))))))).))))))....)))))))))..)))))....))))))))))))))
Structure
a ca aaaga gugguggaagagauggagagagaauu ---- c uuagu uu
gagag gugggg ugu gcaau ggaaguccu gucaug uuUUCCACAGCUUUCUUGAACUUcu cc g
||||| |||||| ||| ||||| ||||||||| |||||| ||||||||||||||||||||||||| ||
cuuuc cacccc acg cguua uuuuuagga cgguac aaaggguguugaaggaacuugaaga gg a
- -- -agga ------------------------au auaa c ucuac ua
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
scaffold00046: 1545633-1545816 [+]
Database links
Mature atr-miR396c
| Accession | MIMAT0033940 |
| Description | Amborella trichopoda atr-miR396c mature miRNA |
| Sequence | 72 - UUCCACAGCUUUCUUGAACUU - 92 |
| Evidence |
experimental
Illumina [1] |
References
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