Accession
MI0027533
Description
Amborella trichopoda
atr-MIR394 precursor miRNA
Gene family
MIPF0000100;
MIR394
Sequence
1329
reads,
538
reads per million, 4 experiments
uuuguuugcauggguuuaucaaaggguuucuugcagagauugUUGGCAUUCUGUCCACCUCCucccucucucuaaaaaaugagaguuuuucgauuuuaaugcaucgugaggaggugggcauccugccaaccacacucugugggcuacucucuguaaaacucaugcaauugcagg
.((((((((((((((((..((.(((((..(((((((((...(((((((...(((((((((((((...(((((........))))).....((((........)))).)))))))))))))...)))))))....)))))))))..))))).))..))))))))))))..)))).
.((((((((((((((((..((.(((((..(((((((((...(((((((...(((((((((((((...(((((........))))).....((((........)))).)))))))))))))...)))))))....)))))))))..))))).))..))))))))))))..)))).
Structure
u -- au a uu -auu UUC -------------------ccu uaa uugu uugcauggguuu ca agggu cuugcagag gUUGGCA UGUCCACCUCCuc cucuc a |||| |||||||||||| || ||||| ||||||||| ||||||| ||||||||||||| ||||| gacg aacguacucaaa gu ucuca gggugucuc caaccgu acggguggaggag gagag a g uu au c uc acac ccu ugcuacguaauuuuagcuuuuu uaa
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
scaffold00001: 3120973-3121146 [+]
Database links
Mature atr-miR394
| Accession | MIMAT0033936 |
| Description | Amborella trichopoda atr-miR394 mature miRNA |
| Sequence | 43 - UUGGCAUUCUGUCCACCUCC - 62 |
| Evidence |
experimental
Illumina [1] |
References
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