Accession
MI0027521
Description
Amborella trichopoda
atr-MIR169c precursor miRNA
Sequence
45
reads,
55
reads per million, 3 experiments
ucaaugaggaggcaaaggucucacaugaagggauggggcacuuuuugUAGCCAAGGAUGACUUGCCUaugcucucaagcauaagagagcuuacuuccuuuugguauucuucaguuucuaagugagucuuccuuggcuacuuauuaugcuucaccccucaugucaggcacaagucuuucauga
...(((((.((((....((((.((((((.(((.(((((((......(((((((((((.(((((((....((((((........)))))).((((.......))))...............))))))).)))))))))))......)))))))))).)))))).))))....)))))))))..
...(((((.((((....((((.((((((.(((.(((((((......(((((((((((.(((((((....((((((........)))))).((((.......))))...............))))))).)))))))))))......)))))))))).)))))).))))....)))))))))..
Structure
uca g aaag c a a cuuuuu U ---------------------------CUau aag augag aggc gucu acauga ggg uggggca gUAGCCAAGGA GACUUGC gcucuc c ||||| |||| |||| |||||| ||| ||||||| ||||||||||| ||||||| |||||| uacuu ucug cgga uguacu ccc acuucgu caucgguuccu cugagug cgagag a -ag - aaca c c - auuauu u aaucuuugacuucuuaugguuuuccuucauu aau
Annotation confidence
Not enough data
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Genome context
scaffold00057: 2391549-2391730 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from atr-MIR169c
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature atr-miR169c
| Accession | MIMAT0033923 |
| Description | Amborella trichopoda atr-miR169c mature miRNA |
| Sequence | 48 - UAGCCAAGGAUGACUUGCCU - 67 |
| Evidence |
experimental
Illumina [1] |
References
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