miRBase entry: atr-MIR166a

Stem-loop atr-MIR166a


Accession
MI0027513
Description
Amborella trichopoda atr-MIR166a precursor miRNA


Sequence

247245 reads, 69209 reads per million, 4 experiments
cuugggguugaggggaauguugucugguucgaaaccauuuugcgauuauauccaucuaucgaaaggauuUCGGACCAGGCUUCAUUCCCCccaaccuucaag
((((((((((.((((((((..(((((((((((((((.(((((.(((.......)))...))))))).)))))))))))))..)))))))).))))).)))))

Structure
     -     a        uu             -  a     --c   ua 
cuugg gguug ggggaaug  gucugguucgaaa cc uuuug   gau  u
||||| ||||| ||||||||  ||||||||||||| || |||||   |||  a
gaacu ccaac CCCCUUAC  CGGACCAGGCUuu gg aaagc   cua  u
     u     c        UU             a  -     uau   cc 


Annotation confidence Not enough data
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Genome context
scaffold00002: 8188982-8189083 [+]

Database links

Mature atr-miR166a

Accession MIMAT0033915
Description Amborella trichopoda atr-miR166a mature miRNA
Sequence 70 - UCGGACCAGGCUUCAUUCCCC - 90
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24357323
    The Amborella genome and the evolution of flowering plants
    "Amborella Genome Project"
    "Science (2013) 342:1241089