Stem-loop atr-MIR8578

Accession

MI0027463

Description

Amborella trichopoda atr-MIR8578 precursor miRNA

Sequence

2958 reads, 1019 reads per million, 4 experiments

aaucUUUAUGAGUGAUCUUUGCAAUAGuuuccuuauggaaauauugugguuuuuggaaggagacuauugcgaaugucacucauuaagauu
((((((.(((((((((.(((((((((((((((((..((((((......))))))..))))))))))))))))).))))))))).))))))

Structure

      U         C                 au      au 
aaucUU AUGAGUGAU UUUGCAAUAGuuuccuu  ggaaau  u
|||||| ||||||||| |||||||||||||||||  ||||||   
uuagaa uacucacug aagcguuaucagaggaa  uuuuug  g
      u         u                 gg      gu 

Annotation confidence Not enough data

Genome context

scaffold00036: 3264771-3264860 [+]

Mature atr-miR8578.1

• Accession: MIMAT0033861
• Description: Amborella trichopoda atr-miR8578.1 mature miRNA
• Sequence: 5 - UUUAUGAGUGAUCUUUGCAAU - 25
• Evidence: experimental ; Illumina [1]

Mature atr-miR8578.2

• Accession: MIMAT0033862
• Description: Amborella trichopoda atr-miR8578.2 mature miRNA
• Sequence: 7 - UAUGAGUGAUCUUUGCAAUAG - 27
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24357323
   The Amborella genome and the evolution of flowering plants
   "Amborella Genome Project"
   "Science (2013) 342:1241089