Stem-loop pxy-mir-8521b-6

Accession

MI0027411

Description

Plutella xylostella pxy-mir-8521b-6 precursor miRNA

Sequence

6350 reads, 723.0 reads per million, 31 experiments

ugUGUUCGUUCUUGUCUCUGGCGCGGCagucagaauucgggacaagcccggagcgguggCUUGUCCCGAAUUUUGACUCGGCCaaaucaaaaccag
.......(((.(((....((((.((..((((((((((((((((((((((......).)))))))))))))))))))))))))))...))))))...

Structure

ugUGUUC   C   UCUC    G  GC                     - gg 
       GUU UUG    UGGC CG  agucagaauucgggacaagcc c  a
       ||| |||    |||| ||  ||||||||||||||||||||| |   
       caa aac    aCCG GC  UCAGUUUUAAGCCCUGUUCgg g  g
----gac   -   -uaa    -  --                     u gc 

Annotation confidence Medium

Genome context

scaffold_127: 919385-919480 [+]

Clustered miRNAs

7 other miRNAs are < 10 kb from pxy-mir-8521b-6

Mature pxy-miR-8521b-5p

• Accession: MIMAT0058622
• Description: Plutella xylostella pxy-miR-8521b-5p mature miRNA
• Sequence: 3 - UGUUCGUUCUUGUCUCUGGCGCGGC - 27
• Evidence: experimental ; Illumina [1]

Mature pxy-miR-8521b-3p

• Accession: MIMAT0033751
• Description: Plutella xylostella pxy-miR-8521b-3p mature miRNA
• Sequence: 60 - CUUGUCCCGAAUUUUGACUCGGCC - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24236051
   Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
   Liang P, Feng B, Zhou X, Gao X
   PLoS One (2013) 8:e78787