Stem-loop pxy-mir-306-1

Accession

MI0027381

Description

Plutella xylostella pxy-mir-306-1 precursor miRNA

Literature search

2 open access papers mention pxy-mir-306-1
(8 sentences)

Sequence

33485 reads, 1877.0 reads per million, 31 experiments

uaacgcagguccauuCCAGGUACUAGGUGACUCUGAguggugcaauaucucAGAGCUGCCUGGUGCCUGAAcauggaucucgaua
...((.((((((((..(((((((((((((.(((((((...........))))))).)))))))))))))...))))))))))...

Structure

uaa  c        -uC             A       uggu 
   cg agguccau   CAGGUACUAGGUG CUCUGAg    g
   || ||||||||   ||||||||||||| |||||||    c
   gc ucuaggua   GUCCGUGGUCCGU GAGAcuc    a
aua  -        cAA             C       uaua 

Annotation confidence High

Genome context

scaffold_310: 37870-37954 [-]

Mature pxy-miR-306-5p

• Accession: MIMAT0033787
• Description: Plutella xylostella pxy-miR-306-5p mature miRNA
• Sequence: 16 - CCAGGUACUAGGUGACUCUGA - 36
• Evidence: experimental ; Illumina [1]

Mature pxy-miR-306-1-3p

• Accession: MIMAT0061506
• Description: Plutella xylostella pxy-miR-306-1-3p mature miRNA
• Sequence: 52 - AGAGCUGCCUGGUGCCUGAA - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24236051
   Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
   Liang P, Feng B, Zhou X, Gao X
   PLoS One (2013) 8:e78787