Stem-loop pxy-mir-9a

Accession

MI0027371

Description

Plutella xylostella pxy-mir-9a precursor miRNA

Literature search

2 open access papers mention pxy-mir-9a
(4 sentences)

Sequence

60510 reads, 3475.0 reads per million, 31 experiments

guaguagauugguuaauuaUCUUUGGUUAUCUAGCUGUAUGAguaauauagacaucaUAAAGCUAGGUUACCGGAGUUaagugccgucuauguc
(..((((((.(((...(((.(((((((.((((((((.(((((((.......)).))))).)))))))).))))))).)))..)))))))))..)

Structure

 ua      u   uaa   U       U        G     -  aa 
g  guagau ggu   uua CUUUGGU AUCUAGCU UAUGA gu  u
|  |||||| |||   ||| ||||||| |||||||| ||||| ||  a
c  uaucug ccg   aaU GAGGCCA UGGAUCGA AUacu ca  u
 ug      -   -ug   U       U        A     a  ga 

Annotation confidence High

Genome context

scaffold_42: 491913-492006 [-]

Mature pxy-miR-9a-5p

• Accession: MIMAT0058617
• Description: Plutella xylostella pxy-miR-9a-5p mature miRNA
• Sequence: 20 - UCUUUGGUUAUCUAGCUGUAUGA - 42
• Evidence: experimental ; Illumina [1]

Mature pxy-miR-9a-3p

• Accession: MIMAT0033776
• Description: Plutella xylostella pxy-miR-9a-3p mature miRNA
• Sequence: 58 - UAAAGCUAGGUUACCGGAGUU - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24236051
   Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
   Liang P, Feng B, Zhou X, Gao X
   PLoS One (2013) 8:e78787