Dead hairpin entry

Stem-loop pxy-mir-8517b

Accession

MI0027346

Description

Plutella xylostella pxy-mir-8517b precursor miRNA

Comment

The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.

Literature search

1 open access papers mention pxy-mir-8517b
(1 sentences)

Sequence

442 reads, 288.0 reads per million, 31 experiments

cuaacccccuuauucauaaaaaaguuacugaacggauUAACUAUUGAACUGUUCUGUCAAAcaauuuguucuuugacagagagugacaaaacaguucaauagcuaauccguccaguaacuUUUUUAUGAAUAAGGGGGuaag
...(((((((((((((((((((((((((((.((((((((.(((((((((((((.(((((.....((((((....))))))...))))).))))))))))))).)))))))).)))))))))))))))))))))))))))...

Structure

cua                           a        A             C     AAcaa      c 
   acccccuuauucauaaaaaaguuacug acggauUA CUAUUGAACUGUU UGUCA     uuuguu u
   ||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||     ||||||  
   uGGGGGAAUAAGUAUUUUUucaaugac ugccuaau gauaacuugacaa acagu     agacag u
gaa                           c        c             a     --gag      u