Stem-loop pxy-mir-308

Accession

MI0027315

Description

Plutella xylostella pxy-mir-308 precursor miRNA

Literature search

3 open access papers mention pxy-mir-308
(8 sentences)

Sequence

5942 reads, 678.0 reads per million, 31 experiments

augCGCAGUAUUAUUCCAGUGAAUGUguuucagcuacAAUCACAGGAUAAUACUGCGAgu
...(((((((((((.((.((((.(((((....)).))).)))).)))))))))))))...

Structure

aug           U  A    A   -  u 
   CGCAGUAUUAU CC GUGA UGU gu u
   ||||||||||| || |||| ||| ||  
   GCGUCAUAAUA GG CACU Aca cg c
ugA           -  A    A   u  a 

Annotation confidence High

Genome context

scaffold_141: 147570-147629 [-]

Mature pxy-miR-308-5p

• Accession: MIMAT0033723
• Description: Plutella xylostella pxy-miR-308-5p mature miRNA
• Sequence: 4 - CGCAGUAUUAUUCCAGUGAAUGU - 26
• Evidence: experimental ; Illumina [1]

Mature pxy-miR-308-3p

• Accession: MIMAT0058604
• Description: Plutella xylostella pxy-miR-308-3p mature miRNA
• Sequence: 38 - AAUCACAGGAUAAUACUGCGA - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24236051
   Identification and developmental profiling of microRNAs in diamondback moth, Plutellaxylostella (L.)
   Liang P, Feng B, Zhou X, Gao X
   PLoS One (2013) 8:e78787