Stem-loop sma-mir-8477

Accession

MI0027279

Description

Schistosoma mansoni sma-mir-8477 precursor miRNA

Sequence

acuguauaugauaagacagaugauaaugcucgacugUGUGAAAUAGUAAGUUAUAaccuaUUAAAACACAUACUAUUCGuacauuagcugagauggauaucuguuucauauaugac
...((((((((...((((((((...((.((((.(((((((.(((((((.(((.(((....))).)))...)))))))..)))).))).))))))...))))))))))))))))...

Structure

acu        uaa        aua  g    a   -    -A       --A   A   c 
   guauauga   gacagaug   au cucg cug UGUG  AAUAGUA   GUU UAa c
   ||||||||   ||||||||   || |||| ||| ||||  |||||||   ||| |||  
   uauauacu   uugucuau   ua gagu gau acau  UUAUCAU   CAA AUU u
cag        ---        agg  -    c   u    GC       ACA   A   a 

Annotation confidence Not enough data

Genome context

SC_0148: 248442-248557 [+]

Mature sma-miR-8477-5p

• Accession: MIMAT0033675
• Description: Schistosoma mansoni sma-miR-8477-5p mature miRNA
• Sequence: 37 - UGUGAAAUAGUAAGUUAUA - 55
• Evidence: experimental ; SOLiD [1]

Mature sma-miR-8477-3p

• Accession: MIMAT0033676
• Description: Schistosoma mansoni sma-miR-8477-3p mature miRNA
• Sequence: 61 - UUAAAACACAUACUAUUCG - 79
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402