Stem-loop sma-mir-8458

Accession

MI0027255

Description

Schistosoma mansoni sma-mir-8458 precursor miRNA

Literature search

1 open access papers mention sma-mir-8458
(1 sentences)

Sequence

ucucugaugggccccaaauaagacgaauuaaauuccaGUGAUAGCCACUAUCCAUCUCCguucaaaaauaCCUUUGACUGGUGGCAAUAacuagguaguuuagauaacuuaaaagaggcucaucaauug
....(((((((((.(...((((.....((((((((((((.((.(((((((..((....................))..))))))).)).))).)).)))))))....))))...).)))))))))....

Structure

ucuc         c aaa    acgaa       -  -   G  A       UC  UCUCCguuc 
    ugaugggcc c   uaag     uuaaauu cc aGU AU GCCACUA  CA         a
    ||||||||| |   ||||     ||||||| || ||| || |||||||  ||          
    acuacucgg g   auuc     gauuuga gg uca UA CGGUGGU  GU         a
guua         a aaa    -aaua       u  a   A  A       CA  UUCCauaaa 

Annotation confidence Not enough data

Genome context

Chr_7.unplaced.SC_0100: 1103164-1103292 [+]

Mature sma-miR-8458-5p

• Accession: MIMAT0033628
• Description: Schistosoma mansoni sma-miR-8458-5p mature miRNA
• Sequence: 38 - GUGAUAGCCACUAUCCAUCUCC - 59
• Evidence: experimental ; Illumina [1], SOLiD [1]

Mature sma-miR-8458-3p

• Accession: MIMAT0033629
• Description: Schistosoma mansoni sma-miR-8458-3p mature miRNA
• Sequence: 71 - CCUUUGACUGGUGGCAAUA - 89
• Evidence: experimental ; Illumina [1], SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402