Stem-loop sma-mir-8457

Accession

MI0027254

Description

Schistosoma mansoni sma-mir-8457 precursor miRNA

Sequence

ugaaaaaaagaacgauauaaucaugcgaguuugUGGGUGGAUAUGCUCGGUGGUguugugaaaaaaaaagaauuaaaauucucauagagaaaucuaguugagaauaucaUCACCGGGUGUUUUUCACCCUCacgcgcuugauaagucaucuuuuguu
.....((((((..(((...((((.(((.((..(.(((((((.(((((((((((((......................(((((((((((....))))..)))))))..)))))))))))))..))))))).))).))).))))..))).))))))...

Structure

ugaaa      ac   aua    u   a  uu U       -U             uugugaaaaaaaaagaauuaaa       --    g 
     aaaaga  gau   auca gcg gu  g GGGUGGA  AUGCUCGGUGGUg                      auucuca  uaga a
     ||||||  |||   |||| ||| ||  | |||||||  |||||||||||||                      |||||||  ||||  
     uuuucu  cug   uagu cgc ca  C CCCACUU  UGUGGGCCACUac                      uaagagu  aucu a
--uug      -a   -aa    u   g  -- U       UU             --------------------ua       ug    a 

Annotation confidence Not enough data

Genome context

Chr_7: 9565480-9565636 [+]

Mature sma-miR-8457-5p

• Accession: MIMAT0033626
• Description: Schistosoma mansoni sma-miR-8457-5p mature miRNA
• Sequence: 34 - UGGGUGGAUAUGCUCGGUGGU - 54
• Evidence: experimental ; Illumina [1], SOLiD [1]

Mature sma-miR-8457-3p

• Accession: MIMAT0033627
• Description: Schistosoma mansoni sma-miR-8457-3p mature miRNA
• Sequence: 110 - UCACCGGGUGUUUUUCACCCUC - 131
• Evidence: experimental ; Illumina [1], SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402