Stem-loop sma-mir-8452

Accession

MI0027248

Description

Schistosoma mansoni sma-mir-8452 precursor miRNA

Sequence

uaauauugaaugguuuauuaguaaagcgaauuuuugaauACCUAUCGCCAUAUAAGGUuuuuaauuUUAUAGUCGGAAGGCCUUCCgaauuucgugauaaaugaaauuuaaa
.....((((((.(((((((......(((((.(((.(((..(((.(((.(.(((((((((...)))))))))).))).)))..))).))).))))))))))))...)))))).

Structure

uaaua      --g       aguaaa     u   u   uA   A   C A         u 
     uugaau   guuuauu      gcgaa uuu gaa  CCU UCG C UAUAAGGUu  
     ||||||   |||||||      ||||| ||| |||  ||| ||| | ||||||||| u
     aauuua   uaaauag      ugcuu aag CUU  GGA GGC G AUAUUuuaa  
----a      aag       ------     u   C   CC   A   U -         u 

Annotation confidence Not enough data

Genome context

Chr_6: 12230644-12230755 [+]

Mature sma-miR-8452-5p

• Accession: MIMAT0033614
• Description: Schistosoma mansoni sma-miR-8452-5p mature miRNA
• Sequence: 40 - ACCUAUCGCCAUAUAAGGU - 58
• Evidence: experimental ; SOLiD [1]

Mature sma-miR-8452-3p

• Accession: MIMAT0033615
• Description: Schistosoma mansoni sma-miR-8452-3p mature miRNA
• Sequence: 67 - UUAUAGUCGGAAGGCCUUCC - 86
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402