Stem-loop sma-mir-8447

Accession

MI0027243

Description

Schistosoma mansoni sma-mir-8447 precursor miRNA

Literature search

1 open access papers mention sma-mir-8447
(1 sentences)

Sequence

ugacugagugauagagagugauuggugCAAUAUGAUGAACACUAUCAgauccaacuuugaguaugGACAAUGAUGAGUGUGUGUAUACgagcuuuuuaacucugauu
.....((((..((((((((.....(((((.........(((((((((..(((((((...))).))))...)))).))))).)))))....)))))))))))).....

Structure

ugacu    ga        gauug     AUAUGAUGA     -    -ga    -   u 
     gagu  uagagagu     gugCA         ACACU AUCA   ucca acu  
     ||||  ||||||||     |||||         ||||| ||||   |||| ||| u
     cuca  auuuuucg     UAUGU         UGUGA UAGU   AGgu uga  
uuagu    --        -agCA     --------G     G    AAC    a   g 

Annotation confidence Not enough data

Genome context

Chr_5: 4860464-4860570 [+]

Mature sma-miR-8447-5p

• Accession: MIMAT0033604
• Description: Schistosoma mansoni sma-miR-8447-5p mature miRNA
• Sequence: 28 - CAAUAUGAUGAACACUAUCA - 47
• Evidence: experimental ; Illumina [1], SOLiD [1]

Mature sma-miR-8447-3p

• Accession: MIMAT0033605
• Description: Schistosoma mansoni sma-miR-8447-3p mature miRNA
• Sequence: 66 - GACAAUGAUGAGUGUGUGUAUAC - 88
• Evidence: experimental ; Illumina [1], SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402