Stem-loop sma-mir-8438

Accession

MI0027231

Description

Schistosoma mansoni sma-mir-8438 precursor miRNA

Sequence

uagaagacuggauguuaggaaguaauguauuCACUAAGGGACCUAAAGGUUauguguuuagucUUUAUGGAGCCUUUGGCAAGgcugaaacaucugucuaauaucccaucauuuu
.....((..((((((((((.((..((((.(((((((((((.(((((((((((......))))))))).))..)))))))......)))))))))).))))))))))..)).....

Structure

uagaa  cu          a  ua    a    ------       -A  -         ug 
     ga  ggauguuagg ag  augu uuCA      CUAAGGG  CC UAAAGGUUa  u
     ||  |||||||||| ||  |||| ||||      |||||||  || |||||||||   
     cu  ccuauaaucu uc  uaca aagu      GGUUUCC  GG AUUUcugau  g
uuuua  ac          g  --    -    cgGAAC       GA  U         uu 

Annotation confidence Not enough data

Genome context

Chr_3: 26396540-26396654 [+]

Mature sma-miR-8438-5p

• Accession: MIMAT0033580
• Description: Schistosoma mansoni sma-miR-8438-5p mature miRNA
• Sequence: 32 - CACUAAGGGACCUAAAGGUU - 51
• Evidence: experimental ; SOLiD [1]

Mature sma-miR-8438-3p

• Accession: MIMAT0033581
• Description: Schistosoma mansoni sma-miR-8438-3p mature miRNA
• Sequence: 64 - UUUAUGGAGCCUUUGGCAAG - 83
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402