Accession
MI0027220
Description
Schistosoma mansoni
sma-mir-8427 precursor miRNA
Sequence
aaaacgacaugguuuuucaugguagcauguugucaucugaaGCUAAUAAGUCUAUUUUAUAuccaaaacgagcuggagaguuauguuuauguGGAACAUCAUGUUCGCCUUgucugauugaaaauauguuccacggaauaucaugcacacg
.......((((((.((((.(((.((((((((.(((((.((.((.((((.(....((((((((...(((((((((....)))).)))))))))))))...).)))).))....)).)).))).))))))))))).)))).))))))......
.......((((((.((((.(((.((((((((.(((((.((.((.((((.(....((((((((...(((((((((....)))).)))))))))))))...).)))).))....)).)).))).))))))))))).)))).))))))......
Structure
aaaacga u a u g - u ---a U A UCUA cca - g
cauggu uuuc ugg agcauguu uca uc ga GC AAUA G UUUUAUAu aaacg agcu g
|||||| |||| ||| |||||||| ||| || || || |||| | |||||||| ||||| ||||
guacua aagg acc uuguauaa agu ag cu CG UUGU C AAGGugua uuugu uuga a
-gcacac u c - a u u gUUC C A -UAC --- a g
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
Chr_2: 5576263-5576413 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from sma-mir-8427
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature sma-miR-8427-5p
| Accession | MIMAT0033558 |
| Description | Schistosoma mansoni sma-miR-8427-5p mature miRNA |
| Sequence | 42 - GCUAAUAAGUCUAUUUUAUA - 61 |
| Evidence |
experimental
SOLiD [1] |
Mature sma-miR-8427-3p
| Accession | MIMAT0033559 |
| Description | Schistosoma mansoni sma-miR-8427-3p mature miRNA |
| Sequence | 93 - GGAACAUCAUGUUCGCCUU - 111 |
| Evidence |
experimental
SOLiD [1] |
References
|
