Stem-loop sma-mir-8417

Accession

MI0027210

Description

Schistosoma mansoni sma-mir-8417 precursor miRNA

Sequence

gugcagucugggauucgUCAGUCUUGGUUAUAAGGUucagugucauacaguuaaaauguaacugaguuuuucaagAGAACUUUACUAUGAAUUAAucucggaugauuu
.....((((((((((.((...((.((((...(((((((..((.....((((((.....)))))).......))...))))))))))).)))).)))))))))).....

Structure

gugca          c  CAG  U    UAU       -ag  --ucaua      a 
     gucugggauu gU   UC UGGU   AAGGUuc   ug       caguua a
     |||||||||| ||   || ||||   |||||||   ||       |||||| a
     uaggcucuAA UA   AG AUCA   UUUCAAG   ac       gucaau u
uuuag          U  ---  U    ---       Aga  uuuuuga      g 

Annotation confidence Not enough data

Genome context

Chr_1.unplaced.SC_0010: 3451065-3451172 [-]

Mature sma-miR-8417-5p

• Accession: MIMAT0033538
• Description: Schistosoma mansoni sma-miR-8417-5p mature miRNA
• Sequence: 18 - UCAGUCUUGGUUAUAAGGU - 36
• Evidence: experimental ; SOLiD [1]

Mature sma-miR-8417-3p

• Accession: MIMAT0033539
• Description: Schistosoma mansoni sma-miR-8417-3p mature miRNA
• Sequence: 76 - AGAACUUUACUAUGAAUUAA - 95
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402