Stem-loop sma-mir-8413

Accession

MI0027206

Description

Schistosoma mansoni sma-mir-8413 precursor miRNA

Sequence

acuguauuauuauaaacgagucUGGAAUAUCUCUCUACCUGUUaguauauuuaaauacaaugauauugugaaguauguuaauaGGUGUCUAUGAAUAUUGUACacauuuuguugacuguuuuuuuuaauuucac
..((.((((..(.((((.((((((.((((((....(((((((((((((((((...((((((...))))))))))))))))))))))).....).))))).))...........)))))))).)..))))..)).

Structure

ac  -u    uu u    g    -----------  G     - -UCUC                 aaa      g 
  ug  auua  a aaac aguc           UG AAUAU C     UACCUGUUaguauauuu   uacaau  
  ||  ||||  | |||| ||||           || ||||| |     |||||||||||||||||   |||||| a
  ac  uaau  u uuug ucag           AU UUAUA G     GUGGauaauuguaugaa   guguua  
-c  uu    uu u    -    uuguuuuacaC  G     A UAUCU                 ---      u 

Annotation confidence Not enough data

Genome context

Chr_1: 39269918-39270051 [+]

Mature sma-miR-8413-5p

• Accession: MIMAT0033530
• Description: Schistosoma mansoni sma-miR-8413-5p mature miRNA
• Sequence: 23 - UGGAAUAUCUCUCUACCUGUU - 43
• Evidence: experimental ; SOLiD [1]

Mature sma-miR-8413-3p

• Accession: MIMAT0033531
• Description: Schistosoma mansoni sma-miR-8413-3p mature miRNA
• Sequence: 84 - GGUGUCUAUGAAUAUUGUAC - 103
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 24069470
   Sex-biased expression of microRNAs in Schistosoma mansoni
   Marco A, Kozomara A, Hui JH, Emery AM, Rollinson D, Griffiths-Jones S, Ronshaugen M
   PLoS Negl Trop Dis (2013) 7:e2402