Stem-loop str-mir-8401

Accession

MI0027182

Description

Strongyloides ratti str-mir-8401 precursor miRNA

Sequence

UUGAAUCAUCACGAAGCCAAUUuaaucucaaucaaaAUUAACUUCUAGACGAUUCGAAU
(((((((.((..((((..(((((...........)))))..))))..)).)))))))..

Structure

--       A  AC    CC     aauc 
  UUGAAUC UC  GAAG  AAUUu    u
  ||||||| ||  ||||  |||||    c
  AGCUUAG AG  CUUC  UUAaa    a
UA       C  AU    AA     acua 

Annotation confidence Not enough data

Genome context

Sratti_scf00002_Chr01: 283546-283604 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from str-mir-8401

Mature str-miR-8401-5p

• Accession: MIMAT0033496
• Description: Strongyloides ratti str-miR-8401-5p mature miRNA
• Sequence: 1 - UUGAAUCAUCACGAAGCCAAUU - 22
• Evidence: experimental ; Illumina [1]

Mature str-miR-8401-3p

• Accession: MIMAT0033497
• Description: Strongyloides ratti str-miR-8401-3p mature miRNA
• Sequence: 37 - AUUAACUUCUAGACGAUUCGAAU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260