Stem-loop str-mir-8392

Accession

MI0027160

Description

Strongyloides ratti str-mir-8392 precursor miRNA

Sequence

AACUCUUGAUUUCUGUAGAAUuuuguuacauuucuuaaUUCACCGGAAACCAGGAGAGG
..((((((.((((((..(((((..(........)..)))))..)))))).))))))...

Structure

-AA      A      UA     uu uua 
   CUCUUG UUUCUG  GAAUu  g   c
   |||||| ||||||  |||||  |    
   GAGGAC AAAGGC  CUUaa  c   a
GGA      C      CA     uu uuu 

Annotation confidence Not enough data

Genome context

Sratti_scf00001_Chr02: 3569727-3569785 [+]

Clustered miRNAs

6 other miRNAs are < 10 kb from str-mir-8392

Mature str-miR-8392-5p

• Accession: MIMAT0033452
• Description: Strongyloides ratti str-miR-8392-5p mature miRNA
• Sequence: 1 - AACUCUUGAUUUCUGUAGAAU - 21
• Evidence: experimental ; Illumina [1]

Mature str-miR-8392-3p

• Accession: MIMAT0033453
• Description: Strongyloides ratti str-miR-8392-3p mature miRNA
• Sequence: 39 - UUCACCGGAAACCAGGAGAGG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260