Stem-loop str-mir-240

Accession

MI0027157

Description

Strongyloides ratti str-mir-240 precursor miRNA

Sequence

AGAAGUUUGGUAGUCAUGAACAuaauacuuuuaaaaugUACUGGCCUUCAAACUUCUUA
((((((((((..((((.(.((((............)))).)))))..))))))))))..

Structure

--          UA    U A    aauac 
  AGAAGUUUGG  GUCA G ACAu     u
  ||||||||||  |||| | ||||      
  UCUUCAAACU  CGGU C Ugua     u
AU          UC    - A    aaauu 

Annotation confidence Not enough data

Genome context

Sratti_scf00001_ChrX: 1911598-1911656 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from str-mir-240

Mature str-miR-240-5p

• Accession: MIMAT0033446
• Description: Strongyloides ratti str-miR-240-5p mature miRNA
• Sequence: 1 - AGAAGUUUGGUAGUCAUGAACA - 22
• Evidence: experimental ; Illumina [1]

Mature str-miR-240-3p

• Accession: MIMAT0033447
• Description: Strongyloides ratti str-miR-240-3p mature miRNA
• Sequence: 39 - UACUGGCCUUCAAACUUCUUA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260