Stem-loop str-mir-8387

Accession

MI0027151

Description

Strongyloides ratti str-mir-8387 precursor miRNA

Sequence

AAAUUUCAUGAUUCGGUAGGAacugaauagaaaauguuUCACCGAAGUCAUGAAGUUUC
(((((((((((((((((.(((((............))))))))).))))))))))))).

Structure

-             -    A     ugaau 
 AAAUUUCAUGAUU CGGU GGAac     a
 ||||||||||||| |||| |||||      
 UUUGAAGUACUGA GCCA CUuug     g
C             A    -     uaaaa 

Annotation confidence Not enough data

Genome context

Sratti_scf00001_ChrX: 1033596-1033654 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from str-mir-8387

Mature str-miR-8387-5p

• Accession: MIMAT0033434
• Description: Strongyloides ratti str-miR-8387-5p mature miRNA
• Sequence: 1 - AAAUUUCAUGAUUCGGUAGGA - 21
• Evidence: experimental ; Illumina [1]

Mature str-miR-8387-3p

• Accession: MIMAT0033435
• Description: Strongyloides ratti str-miR-8387-3p mature miRNA
• Sequence: 39 - UCACCGAAGUCAUGAAGUUUC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260