Stem-loop str-mir-87a

Accession

MI0027135

Description

Strongyloides ratti str-mir-87a precursor miRNA

Sequence

CAUCGGAGACUUUUGGACUCAACCUcagauuguaauaugaagGUGAGCAAGAGCUUCCGGUGUG
((((((((.((((((..((((.(((((..........)).))))))))))))).))))))))..

Structure

--        A      GA    A   -  gauu 
  CAUCGGAG CUUUUG  CUCA CCU ca    g
  |||||||| ||||||  |||| ||| ||     
  GUGGCCUU GAGAAC  GAGU Gga gu    u
GU        C      --    -   a  auaa 

Annotation confidence Not enough data

Genome context

Sratti_scf00001_Chr01: 3619840-3619903 [+]

Mature str-miR-87a-5p

• Accession: MIMAT0033402
• Description: Strongyloides ratti str-miR-87a-5p mature miRNA
• Sequence: 1 - CAUCGGAGACUUUUGGACUCAACCU - 25
• Evidence: experimental ; Illumina [1]

Mature str-miR-87a-3p

• Accession: MIMAT0033403
• Description: Strongyloides ratti str-miR-87a-3p mature miRNA
• Sequence: 43 - GUGAGCAAGAGCUUCCGGUGUG - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260