Stem-loop str-mir-9

Accession

MI0027133

Description

Strongyloides ratti str-mir-9 precursor miRNA

Sequence

UCUUUGGUUAUUUAGCUAUAUGAauaauaagauauuuuuucaUAAGCUGAACGAUCAAAGGAA
(((((((((.(((((((.((((((.((........)).))))))))))))).)))))))))..

Structure

--         A       A      u  uaa 
  UCUUUGGUU UUUAGCU UAUGAa aa   g
  ||||||||| ||||||| |||||| ||    
  GGAAACUAG AAGUCGA AUacuu uu   a
AA         C       -      u  uau 

Annotation confidence Not enough data

Genome context

Sratti_scf00001_Chr02: 1733699-1733761 [+]

Mature str-miR-9-5p

• Accession: MIMAT0033398
• Description: Strongyloides ratti str-miR-9-5p mature miRNA
• Sequence: 1 - UCUUUGGUUAUUUAGCUAUAUGA - 23
• Evidence: experimental ; Illumina [1]

Mature str-miR-9-3p

• Accession: MIMAT0033399
• Description: Strongyloides ratti str-miR-9-3p mature miRNA
• Sequence: 43 - UAAGCUGAACGAUCAAAGGAA - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260