Stem-loop str-mir-7880r

Accession

MI0027127

Description

Strongyloides ratti str-mir-7880r precursor miRNA

Sequence

UGGCUGGGUUGCUCUGCAAAAAuguuuuuaauauacaguuUUUGCGACCAAUCCAAGCCAAA
(((((((((((.((.((((((((((.........))).))))))))).)))))).)))))..

Structure

--     -      C  U       -   uuu 
  UGGCU GGGUUG UC GCAAAAA ugu   u
  ||||| |||||| || ||||||| |||   a
  ACCGA CCUAAC AG CGUUUuu aca   a
AA     A      C  -       g   uau 

Annotation confidence Not enough data

Genome context

Sratti_scf00001_Chr01: 5597178-5597239 [+]

Mature str-miR-7880r-5p

• Accession: MIMAT0033386
• Description: Strongyloides ratti str-miR-7880r-5p mature miRNA
• Sequence: 1 - UGGCUGGGUUGCUCUGCAAAAA - 22
• Evidence: experimental ; Illumina [1]

Mature str-miR-7880r-3p

• Accession: MIMAT0033387
• Description: Strongyloides ratti str-miR-7880r-3p mature miRNA
• Sequence: 41 - UUUGCGACCAAUCCAAGCCAAA - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260