Stem-loop str-mir-81c

Accession

MI0027106

Description

Strongyloides ratti str-mir-81c precursor miRNA

Sequence

AUAGGUCUAUUUGCUUUCUCAUGuugauuauaauuucaUGAGAUCAAAUUAGACUUAUCG
(((((((((((((...(((((((.............))))))).)))).)))))))))..

Structure

--         -    CUU       uugau 
  AUAGGUCUA UUUG   UCUCAUG     u
  ||||||||| ||||   |||||||     a
  UAUUCAGAU AAAC   AGAGUac     u
GC         U    --U       uuuaa 

Annotation confidence Not enough data

Genome context

Sratti_scf00001_ChrX: 2148346-2148405 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from str-mir-81c

Mature str-miR-81c-5p

• Accession: MIMAT0033344
• Description: Strongyloides ratti str-miR-81c-5p mature miRNA
• Sequence: 1 - AUAGGUCUAUUUGCUUUCUCAUG - 23
• Evidence: experimental ; Illumina [1]

Mature str-miR-81c-3p

• Accession: MIMAT0033345
• Description: Strongyloides ratti str-miR-81c-3p mature miRNA
• Sequence: 39 - UGAGAUCAAAUUAGACUUAUCG - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260