Stem-loop str-mir-81b

Accession

MI0027105

Description

Strongyloides ratti str-mir-81b precursor miRNA

Sequence

AUGGGCCUAUGUGUGUCUCGUGguggauuuuaugauauagccaUGAGAUCAUAUUAGACCCAUCU
(((((.(((.((((((((((((((..(((....)))...))))))))).)))))))).)))))..

Structure

--     C   U     -         -gg   u 
  AUGGG CUA GUGUG UCUCGUGgu   auu u
  ||||| ||| ||||| |||||||||   |||  
  UACCC GAU UAUAC AGAGUaccg   uag a
UC     A   -     U         aua   u 

Annotation confidence Not enough data

Genome context

Sratti_scf00003_Chr01: 2844172-2844236 [+]

Mature str-miR-81b-5p

• Accession: MIMAT0033342
• Description: Strongyloides ratti str-miR-81b-5p mature miRNA
• Sequence: 1 - AUGGGCCUAUGUGUGUCUCGUG - 22
• Evidence: experimental ; Illumina [1]

Mature str-miR-81b-3p

• Accession: MIMAT0033343
• Description: Strongyloides ratti str-miR-81b-3p mature miRNA
• Sequence: 44 - UGAGAUCAUAUUAGACCCAUCU - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260