Stem-loop str-bantam

Accession

MI0027090

Description

Strongyloides ratti str-bantam precursor miRNA

Sequence

UGUGAUUUCAAAUGGACUCCAGAuuauuuuauagacaucUGAGAUCAUUCUGAAAUCACGAU
(((((((((((((((.(((.((((............))))))).))))).))))))))))..

Structure

--          -     A   C    uauuu 
  UGUGAUUUCA AAUGG CUC AGAu     u
  |||||||||| ||||| ||| ||||      
  GCACUAAAGU UUACU GAG Ucua     a
UA          C     A   -    cagau 

Annotation confidence Not enough data

Genome context

Sratti_scf00002_ChrX: 95361-95422 [-]

Mature str-bantam-5p

• Accession: MIMAT0033313
• Description: Strongyloides ratti str-bantam-5p mature miRNA
• Sequence: 1 - UGUGAUUUCAAAUGGACUCCAGA - 23
• Evidence: experimental ; Illumina [1]

Mature str-bantam-3p

• Accession: MIMAT0033314
• Description: Strongyloides ratti str-bantam-3p mature miRNA
• Sequence: 40 - UGAGAUCAUUCUGAAAUCACGAU - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260