Stem-loop str-mir-7880b-4

Accession

MI0027088

Description

Strongyloides ratti str-mir-7880b-4 precursor miRNA

Sequence

UGGUUGGAUCGAUCAGCAAAUAcacauuagauaaugucUUUGCGACCGAAUCCAGGCCACG
(((((((((((.((.(((((...(((((....))))).))))))).)).))))).))))..

Structure

--    -     -  A  A     UAc     a 
  UGGU UGGAU CG UC GCAAA   acauu g
  |||| ||||| || || |||||   |||||  
  ACCG ACCUA GC AG CGUUU   uguaa a
GC    G     A  C  -     --c     u 

Annotation confidence Not enough data

Genome context

Sratti_scf00001_ChrX: 2081543-2081603 [-]

Clustered miRNAs

10 other miRNAs are < 10 kb from str-mir-7880b-4

Mature str-miR-7880b-3p

• Accession: MIMAT0033305
• Description: Strongyloides ratti str-miR-7880b-3p mature miRNA
• Sequence: 39 - UUUGCGACCGAAUCCAGGCCACG - 61
• Evidence: experimental ; Illumina [1]

Mature str-miR-7880b-4-5p

• Accession: MIMAT0033310
• Description: Strongyloides ratti str-miR-7880b-4-5p mature miRNA
• Sequence: 1 - UGGUUGGAUCGAUCAGCAAAUA - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260