Stem-loop str-mir-7880b-3

Accession

MI0027087

Description

Strongyloides ratti str-mir-7880b-3 precursor miRNA

Sequence

UGGUUGGAUCAGUUUGCAAACAuauaaucuucaaauuuuUUUGCGACCGAAUCCAGGCCACG
(((((((((..(.(((((((...................))))))).)..))))).))))..

Structure

--    -     CA U       CAuauaau 
  UGGU UGGAU  G UUGCAAA        c
  |||| |||||  | |||||||        u
  ACCG ACCUA  C AGCGUUU        u
GC    G     AG C       uuuuaaac 

Annotation confidence Not enough data

Genome context

Sratti_scf00001_ChrX: 2081351-2081412 [-]

Clustered miRNAs

10 other miRNAs are < 10 kb from str-mir-7880b-3

Mature str-miR-7880b-3p

• Accession: MIMAT0033305
• Description: Strongyloides ratti str-miR-7880b-3p mature miRNA
• Sequence: 40 - UUUGCGACCGAAUCCAGGCCACG - 62
• Evidence: experimental ; Illumina [1]

Mature str-miR-7880b-3-5p

• Accession: MIMAT0033309
• Description: Strongyloides ratti str-miR-7880b-3-5p mature miRNA
• Sequence: 1 - UGGUUGGAUCAGUUUGCAAACA - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23729632
   Conserved miRNAs are candidate post-transcriptional regulators of developmental arrest in free-living and parasitic nematodes
   "Ahmed R, Chang Z, Younis AE, Langnick C, Li N, Chen W, Brattig N, Dieterich C"
   "Genome Biol Evol (2013) 5:1246-1260